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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs28624980 chr17:46106078 G/A 2.63E-8 209 16.43 14.83 9 KM Plot
KIRP rs28628134 chr5:176714569 G/A 4.29E-7 212 4.88 19.27 15.2 KM Plot
KIRP rs28629405 chr16:4525933 G/C 3.38E-6 214 16.45 12.63 10.83 KM Plot
KIRP rs28657903 chr14:24168586 T/C 4.4E-6 211 17.08 12.63 1.2 KM Plot
KIRP rs28663160 chr16:19846937 T/C 2.49E-6 205 14.47 19.5 12.23 KM Plot
KIRP rs28680621 chr16:4518994 G/A 3.74E-6 212 16.43 15.95 10.83 KM Plot
KIRP rs28684504 chr5:176727438 T/C 4.29E-7 212 4.88 19.27 15.2 KM Plot
KIRP rs28715668 chr5:176699268 T/C 3.69E-7 213 0.1 19.27 15.88 KM Plot
KIRP rs2880301 chr13:20100534 C/T 0.000252 214 13.8 20.27 13.17 KM Plot
KIRP rs28844885 chr16:47557388 T/G 7.93E-8 214 17.6 12.32 12.85 KM Plot
KIRP rs2890396 chr20:25720065 T/A 1.08E-8 214 16.43 15.88 0.47 KM Plot
KIRP rs28932178 chr5:176637576 T/C 2.81E-7 211 15.33 19.27 4.93 KM Plot
KIRP rs2894071 chr10:70687786 A/C 7.43E-9 214 14.87 18.77 9.77 KM Plot
KIRP rs2901525 chr11:34902115 T/C 0 214 15.33 17 3.83 KM Plot
KIRP rs291348 chr1:235667690 A/G 0.000593 206 19.53 16.93 13.13 KM Plot